The Doctor nodded and was looking at her "Ah I see." he seemed to be lost in his own head a bit. He leaned on the TARDIS.

He looked at her "I'm fine... no more pain basically." He knew his injures were nearly healed. He didn't plan to take a beating by the Master any time soon.
He seemed to be thinking.
The Doctor wanted things to be ok with Seclusion. He wasn't sure what was bothering her really. He looked worried.