Like I said before, Sep wants to avoid having to repeat the same "meet-and-greet" over and over again, so during the timeskip, he had it so that the new arrivals were brought into the universe near to where we were hiding. So, your ship would have been greeted by our fleet and given the basic explanation of what was going on. They would have been told that they had been pulled into an alternate universe, though whether they fully believe it yet is up to you. Currently, the [i]Resurgence[/i] is about to be host to a meeting to decide on the fleet's next steps, and your ship would have been invited to send a delegation.