To be fair, OoT Ganondorf doesn't get much characterization beyond "blearg, I'm the bad guy." I'll take ya Wind Waker Brodorf over- oh, that's right, OoT Ganondorf is possessed by Ganon, isn't it.

These are some good questions for Dark Cloud. I will say that the story of a Ganondorf that's trying to fight back an evil possessor Ganon and rule Hyrule the "right" way sounds interesting, at least.